Pentair freeze protection, booster pump for cleaner

Freeze protection seems to prevent booster pump from coming on. I'm having the same issue.
Change your run-times to start at 2:00AM until Noon (mine goes until 4:30PM and we do get freeze here as well), or whenever the freeze may happen and you shouldn't have to worry. Or 24/7 at a low RPM and there should be no issues. Hard to freeze moving water.
 
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