We had an extremely hard rain event about a 1.5 weeks ago which caused some localized flooding on my property. Basically my pool house and pool area flooded. I cleaned off the automatic cover last weekend and this weekend I cracked open the pool to see the damage inside which is a thin layer of silt on the bottom. Not sure if you will be able to answer these 2 questions but i thought i would ask anyway.
Photo of the silt below. Would appreciate your thoughts.

- Will the silt stain the liner? - I'm slowly vacuuming the liner with my robotic pool cleaner, but it requires lots of filter cleanings and subsequent settling.
- Should I be testing the water chemistry and adjusting? I closed via the "Closing an inground pool" sticky last fall with Polyquat
Photo of the silt below. Would appreciate your thoughts.
