Pentair Minimax Plus 400 Water Heater running but not heating

What do the flames look like coming off the burners? You might have flames but very weak and so it appears to be heating but will take forever. Is this a natural or propane gas heater?

Mine is natural gas. I have opened the front cover. There are eight burners, six of which are burning with good blue flame. Two seem to be out. I suppose the nozzles may need cleaning. I'll see if I can remove and clean them.
 
Two clogged burners isn't going to degrade the system that much. How cold was the spa water that it took two hours to heat it? I think you have something else going on here and the two clogged orifices isn't going to make up the difference.
 
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