G,
In theory, your Jandy automation, should be able to switch the pump back and forth between Hi and Lo speeds, but obviously not all the time. To do this it will use two relays.. One to drive the low speed and one to drive the high speed. These two relays should NEVER be on at the same time.
So, since both speeds are working, it appears to me that the automation is telling the relays to cycle. The key would be to understand why...
Have you done any reprogramming at all lately?
As a test, I would put the system in the Service mode and see if the pump stops.. If it does, then push the pump/filter button to start the pump and see if it runs one speed or still cycles.
Let's see if we can get one of our Jandy guys to chime in..
Thanks,
Jim R.