I have a similar issue. Moved into a house with a pool this year, so being my first time closing, I made a mistake - after draining to just below the skimmer and shutting off the pump, I turned the MPV to "Winter" and proceeded with other chores. I came back a few hours later to discover that the waste line had siphoned another foot of water through the main drain. The waste is plumbed to the town sewer, so I didn't hear or see it. I know now I should have turned the MPV to "Close" to stop the flow first. My question is should I fill it back up, put in more chemicals, and close as usual, or can I leave it/drain further with plans to replace the liner in the spring? The liner isn't torn or leaking, but it is really faded and has some stains, so it's ugly. Based on what I've read, I shouldn't drain it completely because it may upset the base, but would it be okay to leave it as is (~1/2 to 2/3 full) without covering, then drain the rest of the way in the spring?